Package csb :: Package bio :: Package fragments :: Module rosetta :: Class OutputBuilder

Class OutputBuilder

object --+
         |
        OutputBuilder

Known Subclasses:

ExtendedOutputBuilder

Rosetta fragment file formatter.

Instance Methods

__init__(self, output)
x.__init__(...) initializes x; see help(type(x)) for signature

source code

add_fragment(self, fragment)
Write a new fragment.

source code

add_position(self, qstart, frags)
Write a new assignment origin.

source code

add_residue(self, fragment, residue)
Write a new fragment residue.

source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties
	output
Inherited from `object`: `__class__`

Method Details

init(self, output)
(Constructor)

source code

x.__init__(...) initializes x; see help(type(x)) for signature

Parameters:

output (file) - destination stream

Overrides: object.__init__

(inherited documentation)

add_fragment(self, fragment)

source code

Write a new fragment.

Parameters:

fragment (RosettaFragment)

add_position(self, qstart, frags)

source code

Write a new assignment origin.

Parameters:

qstart (float) - target position
frags (int) - number of fragments, starting at that position

add_residue(self, fragment, residue)

source code

Write a new fragment residue.

Parameters:

fragment (RosettaFragment)
residue (ResidueInfo)

Property Details

output

Get Method:: unreachable.output(self)

Class OutputBuilder

__init__(self, output) (Constructor)

add_fragment(self, fragment)

add_position(self, qstart, frags)

add_residue(self, fragment, residue)

output

init(self, output)
(Constructor)