Package csb :: Package bio :: Package fragments :: Module rosetta

Module rosetta

Rosetta fragment libraries.

This module defines the RosettaFragmentMap objects, which describes a fragment library in Rosetta NNmake format. RosettaFragmentMap has a static factory method for building a library from a fragment file:

>>> RosettaFragmentMap.read('fragments.txt')
<RosettaFragmentMap>

Note: Consider extracting RosettaFragmentMap.read as a Rosetta fragment parser which naturally belongs to csb.bio.io.

Classes
	ExtendedOutputBuilder Builds non-standard fragment files, which contain the CA coordinates of each residue at the end of each line.
	OutputBuilder Rosetta fragment file formatter.
	ResidueInfo Container struct for a single rosetta fragment residue.
	RosettaFragment Represents a single Rosetta fragment match.
	RosettaFragmentMap Represents a Rosetta fragment library.

Variables
	__package__ = `'csb.bio.fragments'`