Package csb :: Package bio :: Package io :: Module wwpdb :: Class SeqResID

Class SeqResID

object --+    
         |    
   EntryID --+
             |
            SeqResID

Same as a StandardID, but contains an additional underscore between te accession number and the chain identifier.

Nested Classes
Inherited from `EntryID`: `__metaclass__`

Instance Methods

str

format(self)
Returns: the identifier in its original format

source code

tuple of str

parse(self, id)
Split id into accession number and chain ID. source code

Inherited from EntryID: __init__, __str__

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __subclasshook__

Static Methods
Inherited from `EntryID`: `create`

Class Variables
	__abstractmethods__ = `frozenset([])`

Properties

Inherited from EntryID: accession, chain, entry_id

Inherited from object: __class__

Method Details

format(self)

source code

Returns: str: the identifier in its original format
Overrides: EntryID.format: (inherited documentation)

parse(self, id)

source code

Split id into accession number and chain ID.

Parameters:

id - PDB identifier

Returns: tuple of str

(accession, chain)

Raises:

InvalidEntryIDError - when id is in an inappropriate format

Overrides: EntryID.parse

(inherited documentation)