Package csb :: Package bio :: Package io :: Module noe :: Class SparkyPeakListReader

Class SparkyPeakListReader

        object --+    
                 |    
BasePeakListReader --+
                     |
                    SparkyPeakListReader

Sparky NOE peak list parser.

Nested Classes
Inherited from `BasePeakListReader`: `__metaclass__`

Instance Methods

__init__(self, elements, connected)
x.__init__(...) initializes x; see help(type(x)) for signature

source code

NOESpectrum

read(self, table)
Parse a Sparky peak list table.

source code

Inherited from BasePeakListReader: read_all, read_file

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables
	__abstractmethods__ = `frozenset([])`

Properties
Inherited from `object`: `__class__`

Method Details

init(self, elements, connected)
(Constructor)

source code

x.__init__(...) initializes x; see help(type(x)) for signature

Parameters:

elements (list of (str or EnumItem)) - list of element names for each dimension
connected (list of (int,int) tuples) - list of covalently connected dimension indices in the format: [(i1,i2),...]

Overrides: object.__init__

(inherited documentation)

read(self, table)

source code

Parse a Sparky peak list table.

Parameters:

table (str) - input peak list

Returns: NOESpectrum

Overrides: BasePeakListReader.read

Class SparkyPeakListReader

__init__(self, elements, connected) (Constructor)

read(self, table)

init(self, elements, connected)
(Constructor)