Package csb :: Package bio :: Package io :: Module noe :: Class BasePeakListReader

Class BasePeakListReader

object --+
         |
        BasePeakListReader

Known Subclasses:

Nested Classes
	__metaclass__ Metaclass for defining Abstract Base Classes (ABCs).

Instance Methods

NOESpectrum

read(self, table)
Parse a peak list table.

source code

NOESpectrum

read_all(self, filenames)
Parse a list of peak list files and merge the resulting spectra.

source code

NOESpectrum

read_file(self, filename)
Parse a peak list file.

source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __init__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables
	__abstractmethods__ = `frozenset(['read'])`

Properties
Inherited from `object`: `__class__`

Method Details

read(self, table)

source code

Parse a peak list table.

Parameters:

table (str) - input peak list table

Returns: NOESpectrum

read_all(self, filenames)

source code

Parse a list of peak list files and merge the resulting spectra. All spectra must have identical dimensions.

Parameters:

filenames (iterable of str) - input file names

Returns: NOESpectrum

joint spectrum

read_file(self, filename)

source code

Parse a peak list file.

Parameters:

filename (str) - input file name

Returns: NOESpectrum