Home       Trees       Indices       Help   
CSB v1.2.5.d7fd331
Package csb :: Package bio :: Package sequence :: Class SequenceAdapter
[frames] | no frames]

Class SequenceAdapter

source code

object --+
         |
        SequenceAdapter
Known Subclasses:

Base wrapper class for AbstractSequence objects. Needs to be sub-classed (does not do anything special on its own).

Instance Methods
 
__getitem__(self, i) source code
 
__init__(self, sequence)
x.__init__(...) initializes x; see help(type(x)) for signature		 source code
 
__iter__(self) source code
 
__repr__(self)
repr(x)		 source code
 
__str__(self)
str(x)		 source code
 
extract(self, positions) source code
 
strip(self) source code
 
subregion(self, start, end) source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Properties
  alphabet
  header
  id
  length
  sequence
  type

Inherited from object: __class__

Method Details

__init__(self, sequence)
(Constructor)

source code 

x.__init__(...) initializes x; see help(type(x)) for signature

Parameters:
Overrides: object.__init__
(inherited documentation)

__repr__(self)
(Representation operator)

source code 

repr(x)

Overrides: object.__repr__
(inherited documentation)

__str__(self)
(Informal representation operator)

source code 

str(x)

Overrides: object.__str__
(inherited documentation)

Property Details

alphabet

Get Method:
unreachable.alphabet(self)

header

Get Method:
unreachable.header(self)

id

Get Method:
unreachable.id(self)

length

Get Method:
unreachable.length(self)

sequence

Get Method:
unreachable.sequence(self)

type

Get Method:
unreachable.type(self)

   Home       Trees       Indices       Help   
CSB v1.2.5.d7fd331
Generated by Epydoc 3.0.1 on Tue Jul 4 20:19:05 2017 http://epydoc.sourceforge.net