Package csb :: Package bio :: Package sequence :: Class ChainSequence

Class ChainSequence

      object --+    
               |    
AbstractSequence --+
                   |
                  ChainSequence

Known Subclasses:

io.wwpdb.SparseChainSequence

Sequence view for csb.bio.structure.Chain objects. See AbstractSequence for details.

Nested Classes
Inherited from `AbstractSequence`: `__metaclass__`

Instance Methods

Inherited from AbstractSequence: __getitem__, __init__, __iter__, __len__, __repr__, __str__, dump, extract, strip, subregion

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __setattr__, __sizeof__, __subclasshook__

Static Methods

ChainSequence

create(chain)
Create a new ChainSequence from existing Chain instance.

source code

Class Variables
	__abstractmethods__ = `frozenset([])`
Inherited from `AbstractSequence`: `DELIMITER`

Properties

Inherited from AbstractSequence: alphabet, header, id, length, residues, sequence, type

Inherited from object: __class__

Method Details

create(chain)
Static Method

source code

Create a new ChainSequence from existing Chain instance.

Parameters:

chain (csb.bio.structure.Chain)

Returns: ChainSequence

Class ChainSequence

create(chain) Static Method

create(chain)
Static Method