Package csb :: Package bio :: Package io :: Module wwpdb :: Class LegacyStructureParser

Class LegacyStructureParser

             object --+    
                      |    
AbstractStructureParser --+
                          |
                         LegacyStructureParser

This is a customized PDB parser, which is designed to read both sequence and atom data from the ATOM section. This is especially useful when parsing PDB files without a header.

Nested Classes
Inherited from `AbstractStructureParser`: `__metaclass__`

Instance Methods

Inherited from AbstractStructureParser: __del__, __init__, guess_chain_type, guess_sequence_type, models, parse, parse_biomolecule, parse_models, parse_residue, parse_residue_safe, parse_structure

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Static Methods
Inherited from `AbstractStructureParser`: `create_parser`

Class Variables
	__abstractmethods__ = `frozenset([])`

Properties

Inherited from AbstractStructureParser: filename, mapper

Inherited from object: __class__