Package csb :: Package bio :: Package io :: Module mrc :: Class DensityMapReader

Class DensityMapReader

object --+
         |
        DensityMapReader

Binary MRC density map reader.

Instance Methods

__init__(self, filename)
x.__init__(...) initializes x; see help(type(x)) for signature

source code

HeaderInfo

inspect_header(self, order='=')
Parse the raw binary header of the density map. source code

DensityInfo

read(self)
Read the entire density map.

source code

DensityInfo

read_header(self)
Read the header of the density map only.

source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Class Variables
	HEADER_SIZE = `1024`

Properties
str	filename Input MRC file name
Inherited from `object`: `__class__`

Method Details

init(self, filename)
(Constructor)

source code

x.__init__(...) initializes x; see help(type(x)) for signature

Parameters:

filename (str) - input MRC file name

Overrides: object.__init__

(inherited documentation)

inspect_header(self, order=`'='`)

source code

Parse the raw binary header of the density map.

Parameters:

order (str) - byte order (defaults to ByteOrder.NATIVE)

Returns: HeaderInfo

header information

read(self)

source code

Read the entire density map.

Returns: DensityInfo: complete density info

read_header(self)

source code

Read the header of the density map only.

Returns: DensityInfo: density info without any actual data (density.data is None)

Property Details

filename

Input MRC file name

Get Method:: unreachable.filename(self) - Input MRC file name
Type:: str

Class DensityMapReader

__init__(self, filename) (Constructor)

inspect_header(self, order='=')

read(self)

read_header(self)

filename

init(self, filename)
(Constructor)

inspect_header(self, order=`'='`)