Package csb :: Package apps :: Module embd :: Class Deconvolution

Class Deconvolution

object --+
         |
        Deconvolution

Blind deconvolution for n-dimensional images.

Instance Methods

__init__(self, data, psf_size, beta_x=1e-10, beta_f=1e-10, cache=True)
x.__init__(...) initializes x; see help(type(x)) for signature

source code

calculate_image(self, cache=False)

source code

eval_corr(self, cache=False)

source code

eval_loss(self, cache=False)

source code

run(self, iterations)
Run multiple iterations.

source code

run_once(self)
Run a single iteration.

source code

Inherited from object: __delattr__, __format__, __getattribute__, __hash__, __new__, __reduce__, __reduce_ex__, __repr__, __setattr__, __sizeof__, __str__, __subclasshook__

Properties
	beta_f
	beta_x
	correlation Current correlation value.
	data
	loss Current loss value.
Inherited from `object`: `__class__`

Method Details

init(self, data, psf_size, beta_x=1e-10, beta_f=1e-10, cache=True)
(Constructor)

source code

x.__init__(...) initializes x; see help(type(x)) for signature

Parameters:

data (array) - EM density map data (data field of csb.bio.io.mrc.DensityInfo)
psf_size (ints) - point spread function size
beta_x (float) - hyperparameters of sparseness constraints
beta_f (float) - hyperparameters of sparseness constraints

Overrides: object.__init__

(inherited documentation)

run(self, iterations)

source code

Run multiple iterations.

Parameters:

iterations (int) - number of iterations to run

Property Details

beta_f

Get Method:: unreachable.beta_f(self)

beta_x

Get Method:: unreachable.beta_x(self)

correlation

Current correlation value.

Get Method:: unreachable.correlation(self) - Current correlation value.

data

Get Method:: unreachable.data(self)

loss

Current loss value.

Get Method:: unreachable.loss(self) - Current loss value.

Class Deconvolution

__init__(self, data, psf_size, beta_x=1e-10, beta_f=1e-10, cache=True) (Constructor)

run(self, iterations)

beta_f

beta_x

correlation

data

loss

init(self, data, psf_size, beta_x=1e-10, beta_f=1e-10, cache=True)
(Constructor)